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MRPL20-AS1 MRPL20 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 148413, updated on 23-Oct-2022

Summary

Official Symbol
MRPL20-AS1provided by HGNC
Official Full Name
MRPL20 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:27125
See related
Ensembl:ENSG00000224870 AllianceGenome:HGNC:27125
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in lymph node (RPKM 7.6), prostate (RPKM 7.4) and 25 other tissues See more
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Genomic context

See MRPL20-AS1 in Genome Data Viewer
Location:
1p36.33
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (1399530..1402046)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (831460..833976)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (1334910..1337426)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit B4 pseudogene 8 Neighboring gene cyclin L2 Neighboring gene mitochondrial ribosomal protein L20 Neighboring gene RNA, 7SL, cytoplasmic 657, pseudogene Neighboring gene MRPL20 divergent transcript

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015434.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC005108, BC104242
    Related
    ENST00000448629.8

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    1399530..1402046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    831460..833976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)