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MM_RS11150 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 [ Methanosarcina mazei Go1 ]

Gene ID: 1480496, updated on 22-Nov-2023

Summary

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Gene symbol
MM_RS11150
Gene description
RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
Locus tag
MM_RS11150
Gene type
protein coding
Organism
Methanosarcina mazei Go1 (strain: Go1, culture-collection: DSM:3647)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina
Old locus tag
MM_2154
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Genomic context

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Sequence:
NC_003901.1 (2556353..2557369)

NC_003901.1Genomic Context describing neighboring genes Neighboring gene DUF106 domain-containing protein Neighboring gene AAA family ATPase Neighboring gene tRNA-Ser Neighboring gene 30S ribosomal protein S13

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003901.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea. Deppenmeier U, et al. J Mol Microbiol Biotechnol, 2002 Jul. PMID 12125824

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
WP_011034085.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003901.1 Reference assembly

    Range
    2556353..2557369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011034085.1 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 [Methanosarcina mazei]

    See identical proteins and their annotated locations for WP_011034085.1

    UniProtKB/Swiss-Prot
    Q8PV20
    Conserved Domains (4) summary
    PRK04270
    Location:21 → 320
    PRK04270; H/ACA RNA-protein complex component Cbf5p; Reviewed
    cd02572
    Location:41 → 219
    PseudoU_synth_hDyskerin; Pseudouridine synthase, human dyskerin like
    pfam01472
    Location:246 → 319
    PUA; PUA domain
    pfam08068
    Location:7 → 58
    DKCLD; DKCLD (NUC011) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8PV20.1

Gene LinkOut

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