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PCYB_083310 transporter [ Plasmodium cynomolgi strain B ]

Gene ID: 14692520, updated on 5-Sep-2024

Summary

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Gene symbol
PCYB_083310
Gene description
transporter
Locus tag
PCYB_083310
See related
PlasmoDB:PCYB_083310; VEuPathDB:PCYB_083310
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Plasmodium cynomolgi strain B (strain: B)
Lineage
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; Plasmodium (Plasmodium)
Orthologs
Plasmodium falciparum all
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Genomic context

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Location:
chromosome: 8
Exon count:
3
Sequence:
NC_020401.1 (1105681..1107010)

NC_020401.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S15Aa Neighboring gene HVA22/TB2/DP1 family protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020401.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plasmodium cynomolgi genome sequences provide insight into Plasmodium vivax and the monkey malaria clade. Tachibana S, et al. Nat Genet, 2012 Sep. PMID 22863735, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity secondary active nitrite transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nitrite transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
transporter
XP_004222117.1
  • putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_020401.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004222069.1 → XP_004222117.1  transporter [Plasmodium cynomolgi strain B]

    See identical proteins and their annotated locations for XP_004222117.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K6UV80
    Conserved Domains (1) summary
    TIGR00790
    Location:35 → 281
    fnt; formate/nitrite transporter
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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