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LINC02003 long intergenic non-protein coding RNA 2003 [ Homo sapiens (human) ]

Gene ID: 146795, updated on 1-Aug-2020

Summary

Official Symbol
LINC02003provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2003provided by HGNC
Primary source
HGNC:HGNC:27099
See related
Ensembl:ENSG00000264026
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more

Genomic context

See LINC02003 in Genome Data Viewer
Location:
17q24.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (72342811..72355136)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (70339081..70351277)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene SOX9 promoter region Neighboring gene SRY-box transcription factor 9 Neighboring gene SOX9 enhancer E7 Neighboring gene long intergenic non-protein coding RNA 673 Neighboring gene uncharacterized LOC107985006 Neighboring gene long intergenic non-protein coding RNA 511

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135222.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005243, AK057377, DA494887
    Related
    ENST00000577573.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20200522

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    72342811..72355136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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