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PF_RS00300 hypothetical protein [ Pyrococcus furiosus DSM 3638 ]

Gene ID: 1467889, updated on 27-Apr-2024

Summary

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Gene symbol
PF_RS00300
Gene description
hypothetical protein
Locus tag
PF_RS00300
Gene type
protein coding
Organism
Pyrococcus furiosus DSM 3638 (strain: DSM 3638, type-material: type strain of Pyrococcus furiosus)
Lineage
Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus
Old locus tag
PF0060
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Genomic context

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Sequence:
NC_003413.1 (66216..67424, complement)

NC_003413.1Genomic Context describing neighboring genes Neighboring gene DUF4910 domain-containing protein Neighboring gene glycosyltransferase Neighboring gene fibrillarin-like rRNA/tRNA 2'-O-methyltransferase Neighboring gene riboflavin synthase Neighboring gene bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD Neighboring gene bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II Neighboring gene 6,7-dimethyl-8-ribityllumazine synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003413.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle. Xue S, et al. Mol Cell, 2010 Sep 24. PMID 20864039, Free PMC Article
  2. Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology. Robb FT, et al. Methods Enzymol, 2001. PMID 11210495
  3. Evidence of recent lateral gene transfer among hyperthermophilic archaea. Diruggiero J, et al. Mol Microbiol, 2000 Nov. PMID 11115105
  4. Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences. Maeder DL, et al. Genetics, 1999 Aug. PMID 10430560, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
hypothetical protein
WP_011011172.1
  • functions along with aFIB and aL7a; guides 2'-O-methylation of ribose to specific sites in RNAs

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003413.1 Reference assembly

    Range
    66216..67424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011011172.1 hypothetical protein PF_RS00300 [Pyrococcus furiosus]

    See identical proteins and their annotated locations for WP_011011172.1

    UniProtKB/TrEMBL
    A0A5C0XN18, I6TYF3, Q8U4M1
    Conserved Domains (1) summary
    PRK14552
    Location:2 → 380
    PRK14552; C/D box methylation guide ribonucleoprotein complex aNOP56 subunit; Provisional
Nucleotide Protein
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