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STK_RS06050 IS607-like element ISSto12 family transposase [ Sulfurisphaera tokodaii str. 7 ]

Gene ID: 1459078, updated on 10-Mar-2023

Summary

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Gene symbol
STK_RS06050
Gene description
IS607-like element ISSto12 family transposase
Locus tag
STK_RS06050
Gene type
protein coding
Organism
Sulfurisphaera tokodaii str. 7 (strain: 7, type-material: type strain of Sulfurisphaera tokodaii)
Lineage
Archaea; Thermoproteota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfurisphaera
Old locus tag
ST1092; STK_10920
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Genomic context

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Sequence:
NC_003106.2 (1074247..1074864, complement)

NC_003106.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene PaREP1 family protein Neighboring gene IS200/IS605 family accessory protein TnpB-related protein Neighboring gene PaREP1 family protein Neighboring gene DNA-3-methyladenine glycosylase Neighboring gene molybdopterin-dependent oxidoreductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003106.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7. Kawarabayasi Y, et al. DNA Res, 2001 Aug 31. PMID 11572479
  2. Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments. Siguier P, et al. Methods Mol Biol, 2012. PMID 22367867

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
IS607-like element ISSto12 family transposase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003106.2 Reference assembly

    Range
    1074247..1074864 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010979106.1 IS607-like element ISSto12 family transposase [Sulfurisphaera tokodaii]

    See identical proteins and their annotated locations for WP_010979106.1

    UniProtKB/TrEMBL
    A0A832TEH9, Q972P0
    Conserved Domains (3) summary
    cd04762
    Location:5 → 51
    HTH_MerR-trunc; Helix-Turn-Helix DNA binding domain of truncated MerR-like proteins
    COG2452
    Location:5 → 199
    COG2452; Predicted site-specific integrase-resolvase [Mobilome: prophages, transposons]
    cd03769
    Location:59 → 194
    SR_IS607_transposase_like; Serine Recombinase (SR) family, IS607-like transposase subfamily, catalytic domain; members contain a DNA binding domain with homology to MerR/SoxR located N-terminal to the catalytic domain. Serine recombinases catalyze site-specific recombination of ...
Nucleotide Protein
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