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trmJ tRNA (cytidine-2'-O-)-methyltransferase TrmJ [ Sulfurisphaera tokodaii str. 7 ]

Gene ID: 1458391, updated on 10-Mar-2023

Summary

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Gene symbol
trmJ
Gene description
tRNA (cytidine-2'-O-)-methyltransferase TrmJ
Locus tag
STK_RS02600
Gene type
protein coding
Organism
Sulfurisphaera tokodaii str. 7 (strain: 7, type-material: type strain of Sulfurisphaera tokodaii)
Lineage
Archaea; Thermoproteota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfurisphaera
Old locus tag
ST0454; STK_04540
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Genomic context

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Sequence:
NC_003106.2 (458399..459082, complement)

NC_003106.2Genomic Context describing neighboring genes Neighboring gene redox-regulated ATPase YchF Neighboring gene bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferase Neighboring gene 30S ribosomal protein S3ae Neighboring gene HemK2/MTQ2 family protein methyltransferase Neighboring gene 16S ribosomal RNA methyltransferase A Neighboring gene DUF655 domain-containing protein Neighboring gene DNA-directed RNA polymerase subunit F

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003106.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of two homologous 2'-O-methyltransferases showing different specificities for their tRNA substrates. Somme J, et al. RNA, 2014 Aug. PMID 24951554, Free PMC Article
  2. Complete genome sequence of an aerobic thermoacidophilic crenarchaeon, Sulfolobus tokodaii strain7. Kawarabayasi Y, et al. DNA Res, 2001 Aug 31. PMID 11572479

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
tRNA (cytidine-2'-O-)-methyltransferase TrmJ
WP_010978427.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003106.2 Reference assembly

    Range
    458399..459082 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010978427.1 MULTISPECIES: tRNA (cytidine-2'-O-)-methyltransferase TrmJ [Sulfurisphaera]

    See identical proteins and their annotated locations for WP_010978427.1

    UniProtKB/TrEMBL
    A0A650CEX9, A0A832WRW6, Q975F7
    Conserved Domains (1) summary
    COG0565
    Location:1 → 227
    TrmJ; tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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