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endA tRNA-intron lyase [ Aeropyrum pernix K1 ]

Gene ID: 1446148, updated on 6-Jun-2024

Summary

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Gene symbol
endA
Gene description
tRNA-intron lyase
Locus tag
APE_RS05550
Gene type
protein coding
Organism
Aeropyrum pernix K1 (strain: K1, culture-collection: NBRC:100138, type-material: type strain of Aeropyrum pernix)
Lineage
Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum
Old locus tag
APE1646; APE_1646.1
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Genomic context

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Sequence:
NC_000854.2 (1043362..1043925)

NC_000854.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene UbiX family flavin prenyltransferase Neighboring gene macro domain-containing protein Neighboring gene Clp1/GlmU family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000854.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A conserved lysine residue in the crenarchaea-specific loop is important for the crenarchaeal splicing endonuclease activity. Okuda M, et al. J Mol Biol, 2011 Jan 7. PMID 21050862
  2. Properties of H. volcanii tRNA intron endonuclease reveal a relationship between the archaeal and eucaryal tRNA intron processing systems. Kleman-Leyer K, et al. Cell, 1997 Jun 13. PMID 9200602
  3. Characterization of a whole set of tRNA molecules in an aerobic hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1. Yamazaki S, et al. DNA Res, 2005. PMID 16769697
  4. Proteome analysis of an aerobic hyperthermophilic crenarchaeon, Aeropyrum pernix K1. Yamazaki S, et al. Mol Cell Proteomics, 2006 May. PMID 16455681
  5. Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1. Kawarabayasi Y, et al. DNA Res, 1999 Apr 30. PMID 10382966

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
tRNA-intron lyase
WP_241759687.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000854.2 Reference assembly

    Range
    1043362..1043925
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_241759687.1 tRNA-intron lyase [Aeropyrum pernix]

    UniProtKB/Swiss-Prot
    Q9YBF1