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APE_RS00300 histone deacetylase family protein [ Aeropyrum pernix K1 ]

Gene ID: 1445539, updated on 12-Mar-2023

Summary

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Gene symbol
APE_RS00300
Gene description
histone deacetylase family protein
Locus tag
APE_RS00300
Gene type
protein coding
Organism
Aeropyrum pernix K1 (strain: K1, culture-collection: NBRC:100138, type-material: type strain of Aeropyrum pernix)
Lineage
Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum
Old locus tag
APE0092; APE_0092.1
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Genomic context

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Sequence:
NC_000854.2 (65371..66471, complement)

NC_000854.2Genomic Context describing neighboring genes Neighboring gene TldD/PmbA family protein Neighboring gene TldD/PmbA family protein Neighboring gene AbrB/MazE/SpoVT family DNA-binding domain-containing protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000854.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of a whole set of tRNA molecules in an aerobic hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1. Yamazaki S, et al. DNA Res, 2005. PMID 16769697
  2. Proteome analysis of an aerobic hyperthermophilic crenarchaeon, Aeropyrum pernix K1. Yamazaki S, et al. Mol Cell Proteomics, 2006 May. PMID 16455681
  3. Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1. Kawarabayasi Y, et al. DNA Res, 1999 Apr 30. PMID 10382966

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
histone deacetylase family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000854.2 Reference assembly

    Range
    65371..66471 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010865483.1 histone deacetylase family protein [Aeropyrum pernix]

    See identical proteins and their annotated locations for WP_010865483.1

    UniProtKB/TrEMBL
    Q9YG09
    Conserved Domains (1) summary
    cd10001
    Location:4 → 309
    HDAC_classII_APAH; Histone deacetylase class IIa
Nucleotide Protein
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