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pdxS pyridoxal 5'-phosphate synthase lyase subunit PdxS [ Thermoplasma volcanium GSS1 ]

Gene ID: 1441138, updated on 4-Apr-2024

Summary

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Gene symbol
pdxS
Gene description
pyridoxal 5'-phosphate synthase lyase subunit PdxS
Locus tag
TVG_RS05360
Gene type
protein coding
Organism
Thermoplasma volcanium GSS1 (strain: GSS1, type-material: type strain of Thermoplasma volcanium)
Lineage
Archaea; Candidatus Thermoplasmatota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma
Old locus tag
TVN0998
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Genomic context

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Sequence:
NC_002689.2 (1050816..1051826, complement)

NC_002689.2Genomic Context describing neighboring genes Neighboring gene coiled-coil protein Neighboring gene asparagine--tRNA ligase Neighboring gene TIGR00297 family protein Neighboring gene adenylosuccinate lyase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002689.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Archaeal adaptation to higher temperatures revealed by genomic sequence of Thermoplasma volcanium. Kawashima T, et al. Proc Natl Acad Sci U S A, 2000 Dec 19. PMID 11121031, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
pyridoxal 5'-phosphate synthase lyase subunit PdxS

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002689.2 Reference assembly

    Range
    1050816..1051826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010917256.1 pyridoxal 5'-phosphate synthase lyase subunit PdxS [Thermoplasma volcanium]

    See identical proteins and their annotated locations for WP_010917256.1

    UniProtKB/Swiss-Prot
    Q979Y3
    Conserved Domains (1) summary
    COG0214
    Location:5 → 336
    PdxS; Pyridoxal biosynthesis lyase PdxS [Coenzyme transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q979Y3.1

Gene LinkOut

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