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MACROD2-IT1 MACROD2 intronic transcript 1 [ Homo sapiens (human) ]

Gene ID: 140848, updated on 23-Nov-2021

Summary

Official Symbol
MACROD2-IT1provided by HGNC
Official Full Name
MACROD2 intronic transcript 1provided by HGNC
Primary source
HGNC:HGNC:16201
See related
Ensembl:ENSG00000227927
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C20orf68; bA467D7.4; NCRNA00227
Expression
Low expression observed in reference dataset See more
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Genomic context

See MACROD2-IT1 in Genome Data Viewer
Location:
20p12.1
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (14554384..14628908)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (14535030..14609554)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene mono-ADP ribosylhydrolase 2 Neighboring gene RNA, U6 small nuclear 228, pseudogene Neighboring gene ring finger protein 11 pseudogene 2 Neighboring gene ribosomal protein S10 pseudogene 2 Neighboring gene MACROD2 antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • MACROD2 intronic transcript 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104193.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL121582, AL139825
    Related
    ENST00000448536.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    14554384..14628908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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