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TMEM71 transmembrane protein 71 [ Homo sapiens (human) ]

Gene ID: 137835, updated on 6-Sep-2017
Official Symbol
TMEM71provided by HGNC
Official Full Name
transmembrane protein 71provided by HGNC
Primary source
HGNC:HGNC:26572
See related
Ensembl:ENSG00000165071 Vega:OTTHUMG00000164647
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
Location:
8q24.22
Exon count:
10
Annotation release Status Assembly Chr Location
108 current GRCh38.p7 (GCF_000001405.33) 8 NC_000008.11 (132709945..132760668, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (133722191..133772914, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene Helicobacter pylori responsive 1 (non-protein coding) Neighboring gene leucine rich repeat containing 6 Neighboring gene uncharacterized LOC105375767 Neighboring gene PHD finger protein 20 like 1 Neighboring gene thyroglobulin Neighboring gene ribosomal protein L21 pseudogene 78

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Markers

Homology

Clone Names

  • FLJ33069, MGC111188

Gene Ontology Provided by GOA

Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrion IDA
Inferred from Direct Assay
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001145153.1NP_001138625.1  transmembrane protein 71 isoform 2

    See identical proteins and their annotated locations for NP_001138625.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate in-frame splice site in the coding region and lacks a coding exon compared to variant 1. The encoded isoform (2) is shorter but has the same N- and C-termini compared to isoform 1.
    Source sequence(s)
    BC062592, BC105783, BG505962
    Consensus CDS
    CCDS47921.1
    UniProtKB/Swiss-Prot
    Q6P5X7
    Related
    ENSP00000367133.4, OTTHUMP00000227150, ENST00000377901.8, OTTHUMT00000379592
    Conserved Domains (1) summary
    pfam15121
    Location:1152
    TMEM71; TMEM71 protein family
  2. NM_144649.2NP_653250.2  transmembrane protein 71 isoform 1

    See identical proteins and their annotated locations for NP_653250.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    BC062592, BG505962
    Consensus CDS
    CCDS6366.1
    UniProtKB/Swiss-Prot
    Q6P5X7
    Related
    ENSP00000349296.3, OTTHUMP00000227149, ENST00000356838.7, OTTHUMT00000379591
    Conserved Domains (1) summary
    pfam15121
    Location:1131
    TMEM71; TMEM71 protein family

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p7 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p7 Primary Assembly

    Range
    132709945..132760668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018919.2 Alternate CHM1_1.1

    Range
    133762980..133813571 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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