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LMXM_25_0190 cysteine peptidase, Clan CA, family C12,putative [ Leishmania mexicana MHOM/GT/2001/U1103 ]

Gene ID: 13449176, updated on 28-Dec-2023

Summary

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Gene symbol
LMXM_25_0190
Gene description
cysteine peptidase, Clan CA, family C12,putative
Locus tag
LMXM_25_0190
Gene type
protein coding
RNA name
cysteine peptidase, Clan CA, family C12,putative
RefSeq status
PROVISIONAL
Organism
Leishmania mexicana MHOM/GT/2001/U1103 (strain: MHOM/GT/2001/U1103)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania
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Genomic context

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Location:
chromosome: 25
Exon count:
1
Sequence:
Chromosome: 25; NC_018329.1 (56878..57579, complement)

Chromosome 25 - NC_018329.1Genomic Context describing neighboring genes Neighboring gene cleavage and polyadenylation specificity factor,putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene putative mitochondrial carrier protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018329.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
cysteine peptidase, Clan CA, family C12,putative
putative ubiquitin carboxyl-terminal hydrolase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018329.1 Reference assembly

    Range
    56878..57579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003876022.1 → XP_003876071.1  cysteine peptidase, Clan CA, family C12,putative [Leishmania mexicana MHOM/GT/2001/U1103]

    See identical proteins and their annotated locations for XP_003876071.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E9AX95
    Conserved Domains (1) summary
    pfam01088
    Location:4 → 217
    Peptidase_C12; Ubiquitin carboxyl-terminal hydrolase, family 1
Nucleotide Protein
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