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CMLE2 beta carboxy-cis-cis-muconate lactonizing enzyme, cyloisomerase, CLME2 [ Zymoseptoria tritici IPO323 ]

Gene ID: 13404413, updated on 14-Dec-2023

Summary

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Gene symbol
CMLE2
Gene description
beta carboxy-cis-cis-muconate lactonizing enzyme, cyloisomerase, CLME2
Locus tag
MYCGRDRAFT_92100
Gene type
protein coding
RNA name
beta carboxy-cis-cis-muconate lactonizing enzyme, cyloisomerase, CLME2
RefSeq status
PROVISIONAL
Organism
Zymoseptoria tritici IPO323 (strain: IPO323, type-material: culture from epitype of Zymoseptoria tritici)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; Zymoseptoria
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Genomic context

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See CMLE2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_018216.1 (3096576..3098029, complement)

Chromosome 3 - NC_018216.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Ca2+-modulated nonselective cation channel polycystin Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018216.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. Goodwin SB, et al. PLoS Genet, 2011 Jun. PMID 21695235, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta carboxy-cis-cis-muconate lactonizing enzyme, cyloisomerase, CLME2
XP_003854209.1
  • Enzyme part of the ketoadipate pathway, a degradation route for the utilization of aromatic compounds.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018216.1 Reference assembly

    Range
    3096576..3098029 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003854161.1 → XP_003854209.1  beta carboxy-cis-cis-muconate lactonizing enzyme, cyloisomerase, CLME2 [Zymoseptoria tritici IPO323]

    See identical proteins and their annotated locations for XP_003854209.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1Y6LF53, F9X6J4
    Conserved Domains (2) summary
    cd01597
    Location:9 → 462
    pCLME; prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like
    PRK09053
    Location:7 → 462
    PRK09053; 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Protein Accession Links
GenPept Link UniProtKB Link
EGP89185.1

Gene LinkOut

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Molecular Biology Databases