U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

esr1 estrogen receptor 1 [ Syngnathoides biaculeatus (alligator pipefish) ]

Gene ID: 133496967, updated on 10-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
esr1
Gene description
estrogen receptor 1
See related
EnsemblRapid:ENSSBIG00005023993
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathoides biaculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathoides
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See esr1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1980259v1 (GCF_019802595.1) 23 NC_084662.1 (11461240..11473692)

Chromosome 23 - NC_084662.1Genomic Context describing neighboring genes Neighboring gene PRP39 pre-mRNA processing factor 39 homolog (yeast) Neighboring gene zinc finger and BTB domain containing 2b Neighboring gene acidic residue methyltransferase 1 Neighboring gene spectrin repeat containing, nuclear envelope 1a Neighboring gene uncharacterized LOC133496419 Neighboring gene uncharacterized LOC133496420 Neighboring gene myc target 1a

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_084662.1 Chromosome 23 Reference ASM1980259v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear estrogen receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in steroid hormone mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
estrogen receptor

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_019802595.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1980259v1 Primary Assembly

Genomic

  1. NC_084662.1 Reference ASM1980259v1 Primary Assembly

    Range
    11461240..11473692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061813097.1 → XP_061669081.1  estrogen receptor

    Related
    ENSSBIP00005042339.1, ENSSBIT00005050286.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.