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AHSA2P activator of HSP90 ATPase homolog 2, pseudogene [ Homo sapiens (human) ]

Gene ID: 130872, updated on 10-Dec-2019

Summary

Official Symbol
AHSA2Pprovided by HGNC
Official Full Name
activator of HSP90 ATPase homolog 2, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:20437
See related
Ensembl:ENSG00000173209
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
AHA1; Hch1; AHSA2
Expression
Ubiquitous expression in spleen (RPKM 24.2), lymph node (RPKM 21.9) and 25 other tissues See more
Orthologs

Genomic context

See AHSA2P in Genome Data Viewer
Location:
2p15
Exon count:
9
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (61177418..61188925)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (61404553..61415240)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374758 Neighboring gene uncharacterized LOC339803 Neighboring gene chromosome 2 open reading frame 74 Neighboring gene ubiquitin specific peptidase 34 Neighboring gene small nucleolar RNA, H/ACA box 70B Neighboring gene uncharacterized LOC105377633

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

NHGRI GWAS Catalog

Description
Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.
NHGRI GWA Catalog
Multiple common variants for celiac disease influencing immune gene expression.
NHGRI GWA Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Other Names

  • AHA1, activator of heat shock 90kDa protein ATPase homolog 2
  • activator of 90 kDa heat shock protein ATPase homolog 2
  • activator of HSP90 ATPase homolog 2

Clone Names

  • FLJ34679, FLJ41715, DKFZp564C236

Gene Ontology Provided by GOA

Function Evidence Code Pubs
ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 
Hsp90 protein binding IEA
Inferred from Electronic Annotation
more info
 
chaperone binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
positive regulation of ATPase activity IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_152210.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC016747, BC050395
  2. NR_152211.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA856729, AC016747, BC030998
    Related
    ENST00000357022.6
  3. NR_152212.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA856729, AC016747
  4. NR_152213.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA856729, AC016747
    Related
    ENST00000642732.1
  5. NR_152215.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA856729, AC016747, BC063789
  6. NR_152216.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA856729, AC016747, AK092505, BC063789

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    61177418..61188925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001321300.1: Suppressed sequence

    Description
    NM_001321300.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  2. NM_001321301.1: Suppressed sequence

    Description
    NM_001321301.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  3. NM_001321302.1: Suppressed sequence

    Description
    NM_001321302.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  4. NM_001321303.1: Suppressed sequence

    Description
    NM_001321303.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  5. NM_001321304.1: Suppressed sequence

    Description
    NM_001321304.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  6. NM_001321305.1: Suppressed sequence

    Description
    NM_001321305.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
  7. NM_152392.4: Suppressed sequence

    Description
    NM_152392.4: This RefSeq was removed because it is now thought that this gene is a pseudogene.
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