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LOC130512596 protein transport protein SEC13 homolog A-like [ Raphanus sativus (radish) ]

Gene ID: 130512596, updated on 20-Nov-2023

Summary

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Gene symbol
LOC130512596
Gene description
protein transport protein SEC13 homolog A-like
Locus tag
Rs2_19415
Gene type
protein coding
RefSeq status
MODEL
Organism
Raphanus sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Genomic context

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See LOC130512596 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM80110v3 (GCF_000801105.2) 5 NC_079515.1 (248812..250627)

Chromosome 5 - NC_079515.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130512354 Neighboring gene protein NRT1/ PTR FAMILY 5.9-like Neighboring gene uncharacterized LOC130512687 Neighboring gene E2F transcription factor-like E2FF Neighboring gene uncharacterized LOC108857866

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079515.1 Chromosome 5 Reference ASM80110v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII-coated vesicle budding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore outer ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein transport protein SEC13 homolog A-like
Names
Protein transport protein SEC13-like protein A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000801105.2-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM80110v3 Primary Assembly

Genomic

  1. NC_079515.1 Reference ASM80110v3 Primary Assembly

    Range
    248812..250627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057010746.1 → XP_056866726.1  protein transport protein SEC13 homolog A-like

    UniProtKB/TrEMBL
    A0A9W3DSC0

  2. XM_057010745.1 → XP_056866725.1  protein transport protein SEC13 homolog A-like

    UniProtKB/TrEMBL
    A0A9W3DSC0
Nucleotide Protein
Heading Accession and Version

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