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fdps farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) [ Triplophysa dalaica ]

Gene ID: 130433022, updated on 27-Mar-2024

Summary

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Gene symbol
fdps
Gene description
farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase)
See related
EnsemblRapid:ENSTDLG00000018754
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa dalaica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
human zebrafish all
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Genomic context

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See fdps in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM1584641v1 (GCF_015846415.1) 12 NC_079553.1 (9779694..9783456)

Chromosome 12 - NC_079553.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130433362 Neighboring gene uncharacterized LOC130433361 Neighboring gene uncharacterized LOC130432701 Neighboring gene RUN and SH3 domain containing 1 Neighboring gene tripartite motif containing 109

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079553.1 Chromosome 12 Reference ASM1584641v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dimethylallyltranstransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables geranyltranstransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in farnesyl diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
farnesyl pyrophosphate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015846415.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1584641v1 Primary Assembly

Genomic

  1. NC_079553.1 Reference ASM1584641v1 Primary Assembly

    Range
    9779694..9783456
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056762661.1 → XP_056618639.1  farnesyl pyrophosphate synthase

    Related
    ENSTDLP00000036376.1, ENSTDLT00000038344.1
Nucleotide Protein
Heading Accession and Version

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