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hlcs holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) [ Triplophysa dalaica ]

Gene ID: 130411613, updated on 27-Mar-2024

Summary

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Gene symbol
hlcs
Gene description
holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)
See related
EnsemblRapid:ENSTDLG00000003239
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa dalaica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
human zebrafish all
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Genomic context

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See hlcs in Genome Data Viewer
Location:
chromosome: 22
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM1584641v1 (GCF_015846415.1) 22 NC_079563.1 (20333737..20352321)

Chromosome 22 - NC_079563.1Genomic Context describing neighboring genes Neighboring gene ripply transcriptional repressor 3 Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class P Neighboring gene SIM bHLH transcription factor 2 Neighboring gene beta/gamma crystallin domain-containing protein 3 Neighboring gene ribosomal oxygenase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079563.1 Chromosome 22 Reference ASM1584641v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables biotin-[acetyl-CoA-carboxylase] ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
biotin--protein ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015846415.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1584641v1 Primary Assembly

Genomic

  1. NC_079563.1 Reference ASM1584641v1 Primary Assembly

    Range
    20333737..20352321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056736384.1 → XP_056592362.1  biotin--protein ligase

    Related
    ENSTDLP00000005303.1, ENSTDLT00000005864.1
Nucleotide Protein
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