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GOLT1A golgi transport 1A [ Homo sapiens (human) ]

Gene ID: 127845, updated on 24-Nov-2020

Summary

Official Symbol
GOLT1Aprovided by HGNC
Official Full Name
golgi transport 1Aprovided by HGNC
Primary source
HGNC:HGNC:24766
See related
Ensembl:ENSG00000174567
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GOT1; hGOT1b; CGI-141; YMR292W; HMFN1187
Expression
Biased expression in liver (RPKM 34.0), duodenum (RPKM 16.2) and 5 other tissues See more
Orthologs

Genomic context

See GOLT1A in Genome Data Viewer
Location:
1q32.1
Exon count:
5
Annotation release Status Assembly Chr Location
109.20201120 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (204198158..204214092, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (204167288..204183220, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene REN promoter and enhancer region Neighboring gene renin Neighboring gene tripartite motif containing 60 pseudogene Neighboring gene KiSS-1 metastasis suppressor Neighboring gene pleckstrin homology domain containing A6 Neighboring gene HNF1 motif-containing MPRA enhancer 91/92 Neighboring gene ribosomal protein L21 pseudogene 19

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ42654, MGC62027

Gene Ontology Provided by GOA

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
endoplasmic reticulum to Golgi vesicle-mediated transport ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
protein transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
Golgi cis cisterna IDA
Inferred from Direct Assay
more info
PubMed 
Golgi membrane IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nuclear envelope IDA
Inferred from Direct Assay
more info
PubMed 
trans-Golgi network IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
vesicle transport protein GOT1A

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198447.2NP_940849.1  vesicle transport protein GOT1A

    See identical proteins and their annotated locations for NP_940849.1

    Status: VALIDATED

    Source sequence(s)
    AK124645
    Consensus CDS
    CCDS1443.1
    UniProtKB/Swiss-Prot
    Q6ZVE7
    Related
    ENSP00000308535.3, ENST00000308302.4
    Conserved Domains (1) summary
    cl02130
    Location:4109
    Got1; Got1/Sft2-like family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20201120

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    204198158..204214092 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017000314.1XP_016855803.1  vesicle transport protein GOT1A isoform X1

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