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setmar SET domain and mariner transposase fusion gene [ Ctenopharyngodon idella (grass carp) ]

Gene ID: 127522252, updated on 24-Mar-2024

Summary

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Gene symbol
setmar
Gene description
SET domain and mariner transposase fusion gene
Gene type
protein coding
RefSeq status
MODEL
Organism
Ctenopharyngodon idella
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Ctenopharyngodon
Orthologs
human zebrafish all
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Genomic context

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See setmar in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current HZGC01 (GCF_019924925.1) 11 NC_067230.1 (26520048..26524006, complement)

Chromosome 11 - NC_067230.1Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix family, member e40 Neighboring gene inositol 1,4,5-trisphosphate receptor, type 1b Neighboring gene uncharacterized LOC127522253 Neighboring gene BRICK1 subunit of SCAR/WAVE actin nucleating complex

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067230.1 Chromosome 11 Reference HZGC01 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K9 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase SETMAR

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019924925.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HZGC01 Primary Assembly

Genomic

  1. NC_067230.1 Reference HZGC01 Primary Assembly

    Range
    26520048..26524006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051912018.1 → XP_051767978.1  histone-lysine N-methyltransferase SETMAR

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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