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SelR methionine sulfoxide reductase SelR [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1272971, updated on 22-Jun-2024

Summary

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Gene symbol
SelR
Gene description
methionine sulfoxide reductase SelR
See related
VectorBase:AGAMI1_003951
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Also known as
smc6; AGAP002985; AGAP013286
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (30444244..30457461)

Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene thiamine transporter 1 Neighboring gene uncharacterized LOC5667533 Neighboring gene serine/threonine-protein kinase PAK 3-like protein Neighboring gene general transcription and DNA repair factor IIH helicase subunit XPD

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptide-methionine (R)-S-oxide reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Smc5-Smc6 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methionine-R-sulfoxide reductase B1; structural maintenance of chromosomes protein 6
Names
AGAP002985-PA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    30444244..30457461
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061645776.1 → XP_061501760.1  structural maintenance of chromosomes protein 6 isoform X4

    UniProtKB/TrEMBL
    Q7QD75, Q8I949

  2. XM_061645775.1 → XP_061501759.1  methionine-R-sulfoxide reductase B1 isoform X3

    UniProtKB/TrEMBL
    F5HKC6

  3. XM_061645774.1 → XP_061501758.1  methionine-R-sulfoxide reductase B1 isoform X3

    UniProtKB/TrEMBL
    F5HKC6

  4. XM_311902.5 → XP_311902.4  structural maintenance of chromosomes protein 6 isoform X2

    See identical proteins and their annotated locations for XP_311902.4

    UniProtKB/TrEMBL
    F7IWF2, Q7QD75, Q8I949
    Conserved Domains (3) summary
    cd03276
    Location:969 → 1081
    ABC_SMC6_euk; ATP-binding cassette domain of eukaryotic SM6 proteins
    smart00968
    Location:506 → 614
    SMC_hinge; SMC proteins Flexible Hinge Domain
    COG1196
    Location:52 → 1062
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  5. XM_061645772.1 → XP_061501756.1  structural maintenance of chromosomes protein 6 isoform X1

    UniProtKB/TrEMBL
    Q7QD75, Q8I949
Nucleotide Protein Strain
Heading Accession and Version

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