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LOC1272107 nucleic acid dioxygenase ALKBH1 [ Anopheles gambiae (African malaria mosquito) ]

Gene ID: 1272107, updated on 11-Apr-2024

Summary

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Gene symbol
LOC1272107
Gene description
nucleic acid dioxygenase ALKBH1
Gene type
protein coding
RefSeq status
MODEL
Organism
Anopheles gambiae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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Genomic context

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Location:
chromosome: X
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (2498435..2499962)

Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene cadherin-86C Neighboring gene uncharacterized LOC1272111 Neighboring gene uveal autoantigen with coiled-coil domains and ankyrin repeats Neighboring gene probable 4-coumarate--CoA ligase 1 Neighboring gene transmembrane protein fend Neighboring gene uncharacterized LOC1272105

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
  2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables broad specificity oxidative DNA demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidative RNA demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in oxidative RNA demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleic acid dioxygenase ALKBH1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference idAnoGambNW_F1_1 Primary Assembly

Genomic

  1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

    Range
    2498435..2499962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061644818.1 → XP_061500802.1  nucleic acid dioxygenase ALKBH1

  2. XM_310984.5 → XP_310984.5  nucleic acid dioxygenase ALKBH1

Nucleotide Protein Strain
Heading Accession and Version

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