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C1orf194 chromosome 1 open reading frame 194 [ Homo sapiens (human) ]

Gene ID: 127003, updated on 27-Nov-2019

Summary

Official Symbol
C1orf194provided by HGNC
Official Full Name
chromosome 1 open reading frame 194provided by HGNC
Primary source
HGNC:HGNC:32331
See related
Ensembl:ENSG00000179902 MIM:618682
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 30.1) See more
Orthologs

Genomic context

See C1orf194 in Genome Data Viewer
Location:
1p13.3
Exon count:
6
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (109105951..109113831, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (109648573..109656484, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene poly(rC) binding protein 1 pseudogene Neighboring gene small Cajal body-specific RNA 2 Neighboring gene KIAA1324 Neighboring gene seryl-tRNA synthetase 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytoskeleton IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
protein C1orf194; uncharacterized protein C1orf194

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001122961.2NP_001116433.1  protein C1orf194 isoform 3

    See identical proteins and their annotated locations for NP_001116433.1

    Status: VALIDATED

    Source sequence(s)
    AL138933, BC127905, BG196327, BG772797
    Consensus CDS
    CCDS41364.1
    UniProtKB/Swiss-Prot
    Q5T5A4
    Related
    ENSP00000358965.4, ENST00000369949.8
    Conserved Domains (1) summary
    pfam12494
    Location:23115
    DUF3695; Protein of unknown function (DUF3695)
  2. NM_001245025.2NP_001231954.1  protein C1orf194 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL138933, AL356488
    Related
    ENSP00000358964.3, ENST00000369948.7
    Conserved Domains (1) summary
    pfam12494
    Location:35127
    DUF3695; Protein of unknown function (DUF3695)
  3. NM_001366200.2NP_001353129.1  protein C1orf194 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL138933, AL356488
    Conserved Domains (1) summary
    pfam12494
    Location:33125
    DUF3695; Protein of unknown function (DUF3695)
  4. NM_001366201.2NP_001353130.1  protein C1orf194 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AL138933, AL356488
    Related
    ENSP00000358961.3, ENST00000369945.7
    Conserved Domains (1) summary
    pfam12494
    Location:2488
    DUF3695; Protein of unknown function (DUF3695)
  5. NM_001366202.2NP_001353131.1  protein C1orf194 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AL138933, AL356488
    Conserved Domains (1) summary
    pfam12494
    Location:676
    DUF3695; Protein of unknown function (DUF3695)

RNA

  1. NR_158762.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL138933, AL356488
    Related
    ENST00000462402.5
  2. NR_158763.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL138933, AL356488
    Related
    ENST00000460065.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    109105951..109113831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011540647.2XP_011538949.1  uncharacterized protein C1orf194 isoform X1

    Conserved Domains (1) summary
    pfam12494
    Location:144236
    DUF3695; Protein of unknown function (DUF3695)
  2. XM_011540648.1XP_011538950.1  uncharacterized protein C1orf194 isoform X4

    Conserved Domains (1) summary
    pfam12494
    Location:144175
    DUF3695; Protein of unknown function (DUF3695)
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