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HLCS holocarboxylase synthetase [ Lagopus muta (rock ptarmigan) ]

Gene ID: 125684740, updated on 8-May-2024

Summary

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Gene symbol
HLCS
Gene description
holocarboxylase synthetase
See related
EnsemblRapid:ENSLMUG00000008653
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagopus muta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus
Orthologs
human mouse all
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Genomic context

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See HLCS in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
100 current bLagMut1 primary (GCF_023343835.1) 1 NC_064433.1 (106055306..106173188, complement)

Chromosome 1 - NC_064433.1Genomic Context describing neighboring genes Neighboring gene claudin 14 Neighboring gene uncharacterized LOC125684807 Neighboring gene SIM bHLH transcription factor 2 Neighboring gene ripply transcriptional repressor 3 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class P

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064433.1 Chromosome 1 Reference bLagMut1 primary Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables biotin-[acetyl-CoA-carboxylase] ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
biotin--protein ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagopus muta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bLagMut1 primary Primary Assembly

Genomic

  1. NC_064433.1 Reference bLagMut1 primary Primary Assembly

    Range
    106055306..106173188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048927173.1 → XP_048783130.1  biotin--protein ligase isoform X1

    Related
    ENSLMUP00000010723.1, ENSLMUT00000014266.1

  2. XM_048927186.1 → XP_048783143.1  biotin--protein ligase isoform X2

    Related
    ENSLMUP00000010719.1, ENSLMUT00000014254.1

RNA

  1. XR_007373326.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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