U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sbcC ATP-dependent dsDNA exonuclease [ Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ]

Gene ID: 1251914, updated on 6-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
sbcC
Gene description
ATP-dependent dsDNA exonuclease
Locus tag
STM0395
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (strain: LT2, serovar: Typhimurium, sub-species: enterica, culture-collection: ATCC:700720, culture-collection: SGSC:1412, type-material: type strain of Salmonella enterica)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_003197.2 (446242..449396, complement)

NC_003197.2Genomic Context describing neighboring genes Neighboring gene putative sugar kinase/putative transcriptional regulator (NagC/XylR family) Neighboring gene MFS family, arabinose polymer transporter Neighboring gene ATP-dependent dsDNA exonuclease Neighboring gene response regulator in two-component regulatory system with PhoR (or CreC) Neighboring gene sensory kinase in two-component regulatory system with PhoB, regulates pho regulon

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003197.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. McClelland M, et al. Nature, 2001 Oct 25. PMID 11677609

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

regulatory

  • Loc: c449396-449391 regulatory_class = ribosome_binding_site

General protein information

Go to the top of the page Help
Preferred Names
ATP-dependent dsDNA exonuclease
NP_459390.1
  • similar to E. coli ATP-dependent dsDNA exonuclease (AAC73500.1); Blastp hit to AAC73500.1 (1048 aa), 70% identity in aa 1 - 1048

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003197.2 Reference assembly

    Range
    446242..449396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_459390.1 ATP-dependent dsDNA exonuclease [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

    See identical proteins and their annotated locations for NP_459390.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5W5ZQU1, A0A626G1U2, A0A6Y1KMW0, A0A705PW89, A0A707HDV4, A0A707U1R2, A0A709EZM4, A0A756NPB5, A0A757A591, A0A758TMP3, A0A765EMV8
    Conserved Domains (1) summary
    PRK10246
    Location:1 → 1046
    PRK10246; exonuclease subunit SbcC; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases