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COL6A3 collagen type VI alpha 3 chain [ Phyllostomus hastatus (greater spear-nosed bat) ]

Gene ID: 123823182, updated on 30-Mar-2024

Summary

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Gene symbol
COL6A3
Gene description
collagen type VI alpha 3 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Phyllostomus hastatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Phyllostominae; Phyllostomus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
45
Annotation release Status Assembly Chr Location
100 current TTU_PhHast_1.1 (GCF_019186645.2) Unplaced Scaffold NW_025333889.1 (1974340..2044865)

NW_025333889.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123823194 Neighboring gene melanophilin Neighboring gene COP9 signalosome subunit 8 Neighboring gene atypical chemokine receptor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_025333889 Unplaced Scaffold Reference TTU_PhHast_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
collagen alpha-3(VI) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phyllostomus hastatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TTU_PhHast_1.1

Genomic

  1. NW_025333889.1 Reference TTU_PhHast_1.1

    Range
    1974340..2044865
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045845610.1 → XP_045701566.1  collagen alpha-3(VI) chain isoform X2

  2. XM_045845616.1 → XP_045701572.1  collagen alpha-3(VI) chain isoform X6

  3. XM_045845609.1 → XP_045701565.1  collagen alpha-3(VI) chain isoform X1

  4. XM_045845612.1 → XP_045701568.1  collagen alpha-3(VI) chain isoform X4

  5. XM_045845611.1 → XP_045701567.1  collagen alpha-3(VI) chain isoform X3

  6. XM_045845614.1 → XP_045701570.1  collagen alpha-3(VI) chain isoform X5

  7. XM_045845618.1 → XP_045701574.1  collagen alpha-3(VI) chain isoform X8

  8. XM_045845615.1 → XP_045701571.1  collagen alpha-3(VI) chain isoform X6

  9. XM_045845617.1 → XP_045701573.1  collagen alpha-3(VI) chain isoform X7

  10. XM_045845619.1 → XP_045701575.1  collagen alpha-3(VI) chain isoform X9

Nucleotide Protein
Heading Accession and Version

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