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virB transcriptional activator VirB [ Shigella flexneri 2a str. 301 ]

Gene ID: 1237991, updated on 6-Oct-2023

Summary

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Gene symbol
virB
Gene description
transcriptional activator VirB
Locus tag
CP0123
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Shigella flexneri 2a str. 301 (strain: 301, serotype: 2a)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
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Genomic context

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Location:
plasmid: pCP301
Sequence:
NC_004851.1 (105792..106721, complement)

NC_004851.1Genomic Context describing neighboring genes Neighboring gene IS100 ORF1 Neighboring gene IpaJ, invasion plasmid antigen Neighboring gene Acp, putative acyl carrier protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004851.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Antiactivator of Type III Secretion, OspD1, Is Transcriptionally Regulated by VirB and H-NS from Remote Sequences in Shigella flexneri. McKenna JA, et al. J Bacteriol, 2020 Apr 27. PMID 32123035, Free PMC Article
  2. Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157. Jin Q, et al. Nucleic Acids Res, 2002 Oct 15. PMID 12384590, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The Antiactivator of Type III Secretion, OspD1, Is Transcriptionally Regulated by VirB and H-NS from Remote Sequences in Shigella flexneri.
    Title: The Antiactivator of Type III Secretion, OspD1, Is Transcriptionally Regulated by VirB and H-NS from Remote Sequences in Shigella flexneri.
Submit: New GeneRIF Correction

General protein information

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Names
transcriptional activator VirB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004851.1 Reference assembly

    Range
    105792..106721 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_858256.1 transcriptional activator VirB [Shigella flexneri 2a str. 301]

    See identical proteins and their annotated locations for NP_858256.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    I6CHQ6
    Conserved Domains (2) summary
    TIGR00180
    Location:34 → 215
    parB_part; ParB/RepB/Spo0J family partition protein
    pfam08775
    Location:182 → 303
    ParB; ParB family
Nucleotide Protein
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Gene LinkOut

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