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ptger1c prostaglandin E receptor 1c (subtype EP1) [ Siniperca chuatsi (mandarin fish) ]

Gene ID: 122868649, updated on 22-Mar-2024

Summary

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Gene symbol
ptger1c
Gene description
prostaglandin E receptor 1c (subtype EP1)
Gene type
protein coding
RefSeq status
MODEL
Organism
Siniperca chuatsi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca
Orthologs
zebrafish all
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Genomic context

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See ptger1c in Genome Data Viewer
Location:
chromosome: LG21
Exon count:
3
Annotation release Status Assembly LG Location
100 current ASM2008510v1 (GCF_020085105.1) LG21 NC_058062.1 (10136556..10140037, complement)

Linkage Group LG21 - NC_058062.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 35-13 Neighboring gene solute carrier family 27 member 1a Neighboring gene adhesion G protein-coupled receptor E2 Neighboring gene adhesion G protein-coupled receptor L1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058062.1 Chromosome LG21 Reference ASM2008510v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables prostaglandin E receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thromboxane receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin E receptor 1c (subtype EP1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Siniperca chuatsi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2008510v1 Primary Assembly

Genomic

  1. NC_058062.1 Reference ASM2008510v1 Primary Assembly

    Range
    10136556..10140037 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044180802.1 → XP_044036737.1  prostaglandin E receptor 1c (subtype EP1)

    Conserved Domains (2) summary
    cd14964
    Location:52 → 76
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:51 → 360
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
Heading Accession and Version

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