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LOC122086931 protein ELC-like [ Macadamia integrifolia ]

Gene ID: 122086931, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122086931
Gene description
protein ELC-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Macadamia integrifolia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Proteaceae; Macadamia
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Genomic context

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Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
100 current SCU_Mint_v3 (GCF_013358625.1) 8 NC_056564.1 (12411751..12423524, complement)

Chromosome 8 - NC_056564.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit d, mitochondrial-like Neighboring gene uncharacterized LOC122085469 Neighboring gene LOB domain-containing protein 1-like Neighboring gene carbamoyl-phosphate synthase large chain, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056564.1 Chromosome 8 Reference SCU_Mint_v3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ELC-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macadamia integrifolia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCU_Mint_v3 Primary Assembly

Genomic

  1. NC_056564.1 Reference SCU_Mint_v3 Primary Assembly

    Range
    12411751..12423524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042655847.1 → XP_042511781.1  protein ELC-like

    Conserved Domains (1) summary
    cl00154
    Location:41 → 161
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

  2. XM_042655846.1 → XP_042511780.1  protein ELC-like

    Conserved Domains (1) summary
    cl00154
    Location:41 → 161
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

  3. XM_042655845.1 → XP_042511779.1  protein ELC-like

    Conserved Domains (1) summary
    cl00154
    Location:41 → 161
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

  4. XM_042655844.1 → XP_042511778.1  protein ELC-like

    Conserved Domains (1) summary
    cl00154
    Location:41 → 161
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...

  5. XM_042655843.1 → XP_042511777.1  protein ELC-like

    Conserved Domains (1) summary
    cl00154
    Location:41 → 161
    UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...
Nucleotide Protein
Heading Accession and Version

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