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LOC121744247 syntaxin-125-like [ Salvia splendens ]

Gene ID: 121744247, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121744247
Gene description
syntaxin-125-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvia splendens
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salviinae; Salvia; Salvia subgen. Calosphace; core Calosphace
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Genomic context

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See LOC121744247 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
100 current SspV2 (GCF_004379255.1) 8 NC_056039.1 (29719849..29721070)

Chromosome 8 - NC_056039.1Genomic Context describing neighboring genes Neighboring gene sphingosine kinase 1-like Neighboring gene pentatricopeptide repeat-containing protein At1g51965, mitochondrial-like Neighboring gene uncharacterized LOC121745374 Neighboring gene uncharacterized metal-dependent hydrolase YabD-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056039.1 Chromosome 8 Reference SspV2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-125-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvia splendens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SspV2 Primary Assembly

Genomic

  1. NC_056039.1 Reference SspV2 Primary Assembly

    Range
    29719849..29721070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042137726.1 → XP_041993660.1  syntaxin-125-like

    Conserved Domains (1) summary
    pfam00804
    Location:23 → 217
    Syntaxin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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