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LOC121571646 lysophosphatidic acid phosphatase type 6-like [ Coregonus clupeaformis (lake whitefish) ]

Gene ID: 121571646, updated on 28-May-2024

Summary

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Gene symbol
LOC121571646
Gene description
lysophosphatidic acid phosphatase type 6-like
See related
EnsemblRapid:ENSCCFG00005039859
Gene type
protein coding
RefSeq status
MODEL
Organism
Coregonus clupeaformis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Coregoninae; Coregonus
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Genomic context

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See LOC121571646 in Genome Data Viewer
Location:
chromosome: 40
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM2061545v1 (GCF_020615455.1) 40 NC_059231.1 (23350167..23356843, complement)
100 previous assembly ASM1839867v1 (GCF_018398675.1) 8 NC_055074.1 (40332808..40339482)

Chromosome 40 - NC_059231.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121571649 Neighboring gene B-cell CLL/lymphoma 9 protein-like Neighboring gene gap junction alpha-5 protein-like Neighboring gene gap junction alpha-8 protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophosphatidic acid phosphatase type 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coregonus clupeaformis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2061545v1 Primary Assembly

Genomic

  1. NC_059231.1 Reference ASM2061545v1 Primary Assembly

    Range
    23350167..23356843 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041883235.2 → XP_041739169.1  lysophosphatidic acid phosphatase type 6-like isoform X1

    Related
    ENSCCFP00005091659.1, ENSCCFT00005098569.1
    Conserved Domains (1) summary
    cd07061
    Location:51 → 379
    HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction

  2. XM_041883236.2 → XP_041739170.1  lysophosphatidic acid phosphatase type 6-like isoform X2

    Conserved Domains (1) summary
    cd07061
    Location:51 → 379
    HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction

  3. XM_041883234.2 → XP_041739168.1  lysophosphatidic acid phosphatase type 6-like isoform X1

    Related
    ENSCCFP00005091660.1, ENSCCFT00005098570.1
    Conserved Domains (1) summary
    cd07061
    Location:51 → 379
    HP_HAP_like; Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction
Nucleotide Protein
Heading Accession and Version

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