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col13a1 collagen, type XIII, alpha 1 [ Polyodon spathula (Mississippi paddlefish) ]

Gene ID: 121325122, updated on 22-Mar-2024

Summary

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Gene symbol
col13a1
Gene description
collagen, type XIII, alpha 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Polyodon spathula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 13
Exon count:
37
Annotation release Status Assembly Chr Location
100 current ASM1765450v1 (GCF_017654505.1) 13 NC_054546.1 (22917214..23091129, complement)

Chromosome 13 - NC_054546.1Genomic Context describing neighboring genes Neighboring gene protein FAM241B-like Neighboring gene cGMP-dependent protein kinase 2 Neighboring gene core histone macro-H2A.2 Neighboring gene golgi brefeldin A resistant guanine nucleotide exchange factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_054546.1 Chromosome 13 Reference ASM1765450v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collagen alpha-1(XIII) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1765450v1 Primary Assembly

Genomic

  1. NC_054546.1 Reference ASM1765450v1 Primary Assembly

    Range
    22917214..23091129 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041267412.1 → XP_041123346.1  collagen alpha-1(XIII) chain

    Conserved Domains (1) summary
    PHA03169
    Location:460 → 618
    PHA03169; hypothetical protein; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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