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SDR9C7 short chain dehydrogenase/reductase family 9C member 7 [ Homo sapiens (human) ]

Gene ID: 121214, updated on 13-Jun-2021

Summary

Official Symbol
SDR9C7provided by HGNC
Official Full Name
short chain dehydrogenase/reductase family 9C member 7provided by HGNC
Primary source
HGNC:HGNC:29958
See related
Ensembl:ENSG00000170426 MIM:609769
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RDHS; SDRO; SDR-O; ARCI13
Summary
This gene encodes a protein with similarity to the short-chain dehydrogenase/reductase (SDR) family but has not been shown to have retinoid or dehydrogenase activities. [provided by RefSeq, Apr 2010]
Expression
Biased expression in skin (RPKM 17.6) and esophagus (RPKM 5.2) See more
Orthologs
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Genomic context

See SDR9C7 in Genome Data Viewer
Location:
12q13.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (56923133..56934408, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (57316917..57328192, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene hydroxysteroid 17-beta dehydrogenase 6 Neighboring gene YWHAQ pseudogene 3 Neighboring gene retinol dehydrogenase 16 (all-trans) pseudogene Neighboring gene retinol dehydrogenase 16

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ16333, MGC126600, MGC126602

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables NAD-retinol dehydrogenase activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
short-chain dehydrogenase/reductase family 9C member 7
Names
RDH-S
orphan short-chain dehydrogenase / reductase
orphan short-chain dehydrogenase/reductase
retinol dehydrogenase similar protein
NP_683695.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_148897.3NP_683695.1  short-chain dehydrogenase/reductase family 9C member 7

    See identical proteins and their annotated locations for NP_683695.1

    Status: REVIEWED

    Source sequence(s)
    AC026120, AK122782, BC101551
    Consensus CDS
    CCDS8926.1
    UniProtKB/Swiss-Prot
    Q8NEX9
    Related
    ENSP00000293502.1, ENST00000293502.2
    Conserved Domains (1) summary
    cd09805
    Location:26302
    type2_17beta_HSD-like_SDR_c; human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    56923133..56934408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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