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cbx4 chromobox homolog 4 (Pc class homolog, Drosophila) [ Gasterosteus aculeatus (three-spined stickleback) ]

Gene ID: 120827915, updated on 18-Jun-2024

Summary

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Gene symbol
cbx4
Gene description
chromobox homolog 4 (Pc class homolog, Drosophila)
See related
Ensembl:ENSGACG00000011731
Gene type
protein coding
RefSeq status
MODEL
Organism
Gasterosteus aculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
100 current GAculeatus_UGA_version5 (GCF_016920845.1) 11 NC_053222.1 (11543349..11550772)

Chromosome 11 - NC_053222.1Genomic Context describing neighboring genes Neighboring gene alpha glucosidase Neighboring gene TBC1 domain family, member 16 Neighboring gene meteorin-like protein Neighboring gene chromobox homolog 8a (Pc class homolog, Drosophila)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053222.1 Chromosome 11 Reference GAculeatus_UGA_version5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 SUMO-protein ligase CBX4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gasterosteus aculeatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GAculeatus_UGA_version5 Primary Assembly

Genomic

  1. NC_053222.1 Reference GAculeatus_UGA_version5 Primary Assembly

    Range
    11543349..11550772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040191099.1 → XP_040047033.1  E3 SUMO-protein ligase CBX4 isoform X1

    UniProtKB/TrEMBL
    G3PD49
    Related
    ENSGACP00000015523.1, ENSGACT00000015554.2
    Conserved Domains (1) summary
    cd18645
    Location:8 → 62
    CD_Cbx4; chromodomain of chromobox homolog 4

  2. XM_040191100.1 → XP_040047034.1  E3 SUMO-protein ligase CBX4 isoform X2

  3. XM_040191101.1 → XP_040047035.1  E3 SUMO-protein ligase CBX4 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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