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cebpb CCAAT enhancer binding protein beta [ Xiphias gladius (swordfish) ]

Gene ID: 120804463, updated on 21-Mar-2024

Summary

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Gene symbol
cebpb
Gene description
CCAAT enhancer binding protein beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphias gladius
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Istiophoriformes; Xiphiidae; Xiphias
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 18
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM1685928v1 (GCF_016859285.1) 18 NC_053417.1 (23695233..23697005, complement)

Chromosome 18 - NC_053417.1Genomic Context describing neighboring genes Neighboring gene kelch-like protein 12 Neighboring gene protein tyrosine phosphatase non-receptor type 1 Neighboring gene uncharacterized LOC120804467 Neighboring gene plasmanylethanolamine desaturase 1 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053417.1 Chromosome 18 Reference ASM1685928v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCAAT/enhancer-binding protein beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphias gladius Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1685928v1 Primary Assembly

Genomic

  1. NC_053417.1 Reference ASM1685928v1 Primary Assembly

    Range
    23695233..23697005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040153935.1 → XP_040009869.1  CCAAT/enhancer-binding protein beta

    Conserved Domains (1) summary
    cd14712
    Location:232 → 302
    bZIP_CEBPB; Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein beta (CEBPB): a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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