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LOC120704041 ferritin-1, chloroplastic-like [ Panicum virgatum (switchgrass) ]

Gene ID: 120704041, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120704041
Gene description
ferritin-1, chloroplastic-like
Locus tag
PVAP13_4KG338200
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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Location:
chromosome: 4K
Exon count:
8
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 4K NC_053139.1 (40566600..40569104, complement)

Chromosome 4K - NC_053139.1Genomic Context describing neighboring genes Neighboring gene phosphoenolpyruvate phosphatase-like Neighboring gene ER membrane protein complex subunit 7 homolog Neighboring gene pyrophosphate-energized vacuolar membrane proton pump-like Neighboring gene uncharacterized LOC120704043

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053139.1 Chromosome 4K Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ferric iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sequestering of iron ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ferritin-1, chloroplastic-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053139.1 Reference P.virgatum_v5 Primary Assembly

    Range
    40566600..40569104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039988287.1 → XP_039844221.1  ferritin-1, chloroplastic-like isoform X1

    UniProtKB/TrEMBL
    A0A8T0TMG0, A0A8T0TQN3
    Conserved Domains (1) summary
    cd01056
    Location:91 → 250
    Euk_Ferritin; eukaryotic ferritins

  2. XM_039988288.1 → XP_039844222.1  ferritin-1, chloroplastic-like isoform X2

    UniProtKB/TrEMBL
    A0A8T0TMG0, A0A8T0TW30
    Conserved Domains (1) summary
    cd01056
    Location:91 → 228
    Euk_Ferritin; eukaryotic ferritins
Nucleotide Protein Strain
Heading Accession and Version

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