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LOC120701104 xyloglucan galactosyltransferase KATAMARI1 homolog [ Panicum virgatum (switchgrass) ]

Gene ID: 120701104, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120701104
Gene description
xyloglucan galactosyltransferase KATAMARI1 homolog
Locus tag
PVAP13_3KG470502
Gene type
protein coding
RefSeq status
MODEL
Organism
Panicum virgatum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes
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Genomic context

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See LOC120701104 in Genome Data Viewer
Location:
chromosome: 3K
Exon count:
1
Annotation release Status Assembly Chr Location
100 current P.virgatum_v5 (GCF_016808335.1) 3K NC_053138.1 (57682586..57684306)

Chromosome 3K - NC_053138.1Genomic Context describing neighboring genes Neighboring gene factor of DNA methylation 2-like Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 Neighboring gene peroxisomal membrane protein PEX14-like Neighboring gene uncharacterized LOC120699864 Neighboring gene translation initiation factor IF-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053138.1 Chromosome 3K Reference P.virgatum_v5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xyloglucan galactosyltransferase KATAMARI1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Panicum virgatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.virgatum_v5 Primary Assembly

Genomic

  1. NC_053138.1 Reference P.virgatum_v5 Primary Assembly

    Range
    57682586..57684306
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039985263.1 → XP_039841197.1  xyloglucan galactosyltransferase KATAMARI1 homolog

    UniProtKB/TrEMBL
    A0A8T0VBI6
    Conserved Domains (1) summary
    pfam03016
    Location:120 → 450
    Exostosin; Exostosin family
Nucleotide Protein Strain
Heading Accession and Version

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