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HLCS holocarboxylase synthetase [ Hyaena hyaena (striped hyena) ]

Gene ID: 120229710, updated on 21-Mar-2024

Summary

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Gene symbol
HLCS
Gene description
holocarboxylase synthetase
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyaena hyaena
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Hyaenidae; Hyaena
Orthologs
human mouse all
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Genomic context

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See HLCS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM300989v1 (GCF_003009895.1) Unplaced Scaffold NW_024080634.1 (5967757..6188620, complement)

NW_024080634.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120229972 Neighboring gene uncharacterized LOC120229950 Neighboring gene SIM bHLH transcription factor 2 Neighboring gene ripply transcriptional repressor 3 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class P

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024080634 Unplaced Scaffold Reference ASM300989v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables biotin-[acetyl-CoA-carboxylase] ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
biotin--protein ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hyaena hyaena Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM300989v1 Primary Assembly

Genomic

  1. NW_024080634.1 Reference ASM300989v1 Primary Assembly

    Range
    5967757..6188620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039228875.1 → XP_039084806.1  biotin--protein ligase

    Conserved Domains (3) summary
    cd16442
    Location:616 → 800
    BPL; biotin protein ligase
    pfam02237
    Location:818 → 865
    BPL_C; Biotin protein ligase C terminal domain
    cl00020
    Location:311 → 540
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

RNA

  1. XR_005527818.1 RNA Sequence

  2. XR_005527817.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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