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LOC120206827 programmed cell death protein 2-like [ Hibiscus syriacus ]

Gene ID: 120206827, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120206827
Gene description
programmed cell death protein 2-like
Locus tag
F3Y22_tig00014064pilonHSYRG00012
Gene type
protein coding
RefSeq status
MODEL
Organism
Hibiscus syriacus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Hibiscus
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Genomic context

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See LOC120206827 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM638163v2 (GCF_006381635.1) Unplaced Scaffold NW_024062313.1 (62493..65273, complement)

NW_024062313.1Genomic Context describing neighboring genes Neighboring gene small GTPase LIP1-like Neighboring gene uncharacterized protein At5g64816 Neighboring gene uncharacterized LOC120206832 Neighboring gene protein HEAT INTOLERANT 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024062313 Unplaced Scaffold Reference ASM638163v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
programmed cell death protein 2-like
Names
putative Benzoate carboxyl methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hibiscus syriacus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM638163v2 Primary Assembly

Genomic

  1. NW_024062313.1 Reference ASM638163v2 Primary Assembly

    Range
    62493..65273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039206402.1 → XP_039062333.1  programmed cell death protein 2-like

    UniProtKB/TrEMBL
    A0A6A3C541
    Conserved Domains (1) summary
    pfam04194
    Location:239 → 366
    PDCD2_C; Programmed cell death protein 2, C-terminal putative domain
Nucleotide Protein
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Gene LinkOut

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