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LOC120090563 exopolygalacturonase-like [ Benincasa hispida (wax gourd) ]

Gene ID: 120090563, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120090563
Gene description
exopolygalacturonase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Benincasa hispida
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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Genomic context

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See LOC120090563 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ASM972705v1 (GCF_009727055.1) 11 NC_052359.1 (12181445..12189011)

Chromosome 11 - NC_052359.1Genomic Context describing neighboring genes Neighboring gene protein BONZAI 3-like Neighboring gene exopolygalacturonase-like Neighboring gene exopolygalacturonase-like Neighboring gene uncharacterized LOC120090565

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052359.1 Chromosome 11 Reference ASM972705v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exopolygalacturonase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM972705v1

Genomic

  1. NC_052359.1 Reference ASM972705v1

    Range
    12181445..12189011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039048290.1 → XP_038904218.1  exopolygalacturonase-like

    Conserved Domains (1) summary
    cl19188
    Location:27 → 403
    PL-6; Polysaccharide Lyase Family 6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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