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LOC120084904 oligouridylate-binding protein 1B-like [ Benincasa hispida (wax gourd) ]

Gene ID: 120084904, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120084904
Gene description
oligouridylate-binding protein 1B-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Benincasa hispida
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Benincasa
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Genomic context

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See LOC120084904 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM972705v1 (GCF_009727055.1) 1 NC_052349.1 (71026945..71036242, complement)

Chromosome 1 - NC_052349.1Genomic Context describing neighboring genes Neighboring gene protein FLUORESCENT IN BLUE LIGHT, chloroplastic Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene protein TIFY 10a-like Neighboring gene uncharacterized LOC120072738

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052349.1 Chromosome 1 Reference ASM972705v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oligouridylate-binding protein 1B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Benincasa hispida Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM972705v1

Genomic

  1. NC_052349.1 Reference ASM972705v1

    Range
    71026945..71036242 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039040721.1 → XP_038896649.1  oligouridylate-binding protein 1B-like isoform X2

    Conserved Domains (3) summary
    cd12614
    Location:54 → 124
    RRM1_PUB1; RNA recognition motif 1 (RRM1) found in yeast nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 and similar proteins
    cd12619
    Location:136 → 215
    RRM2_PUB1; RNA recognition motif 2 (RRM2) found in yeast nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 and similar proteins
    cd12622
    Location:257 → 333
    RRM3_PUB1; RNA recognition motif 3 (RRM3) found in yeast nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 and similar proteins

  2. XM_039040717.1 → XP_038896645.1  oligouridylate-binding protein 1B-like isoform X1

    Conserved Domains (3) summary
    cd12614
    Location:54 → 124
    RRM1_PUB1; RNA recognition motif 1 (RRM1) found in yeast nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 and similar proteins
    cd12619
    Location:136 → 215
    RRM2_PUB1; RNA recognition motif 2 (RRM2) found in yeast nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 and similar proteins
    cd12622
    Location:258 → 334
    RRM3_PUB1; RNA recognition motif 3 (RRM3) found in yeast nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 and similar proteins
Nucleotide Protein
Heading Accession and Version

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