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LOC118413439 deubiquitinase DESI2-like [ Branchiostoma floridae (Florida lancelet) ]

Gene ID: 118413439, updated on 14-Dec-2023

Summary

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Gene symbol
LOC118413439
Gene description
deubiquitinase DESI2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Branchiostoma floridae
Lineage
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Bfl_VNyyK (GCF_000003815.2) 1 NC_049979.1 (12648776..12654326, complement)

Chromosome 1 - NC_049979.1Genomic Context describing neighboring genes Neighboring gene HEAT repeat-containing protein 5B-like Neighboring gene cytochrome c oxidase assembly protein COX20, mitochondrial-like Neighboring gene coiled-coil domain-containing protein 97-like Neighboring gene zinc finger protein 143-like Neighboring gene exportin-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_049979.1 Chromosome 1 Reference Bfl_VNyyK Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle. Yue JX, et al. Genome Biol Evol, 2016 Aug 25. PMID 27412606, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deubiquitinase DESI2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Branchiostoma floridae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bfl_VNyyK Primary Assembly

Genomic

  1. NC_049979.1 Reference Bfl_VNyyK Primary Assembly

    Range
    12648776..12654326 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035816819.1 → XP_035672712.1  deubiquitinase DESI2-like

    UniProtKB/TrEMBL
    A0A9J7KY93, C3Y071
    Conserved Domains (1) summary
    pfam05903
    Location:8 → 151
    Peptidase_C97; PPPDE putative peptidase domain
Nucleotide Protein Strain
Heading Accession and Version

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