U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC118364774 prostaglandin E2 receptor EP1 subtype-like [ Oncorhynchus keta (chum salmon) ]

Gene ID: 118364774, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC118364774
Gene description
prostaglandin E2 receptor EP1 subtype-like
See related
EnsemblRapid:ENSOKEG00005009030
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus keta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC118364774 in Genome Data Viewer
Location:
chromosome: 32
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current Oket_V2 (GCF_023373465.1) 32 NC_068452.1 (36045373..36056458)

Chromosome 32 - NC_068452.1Genomic Context describing neighboring genes Neighboring gene 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9-like Neighboring gene adhesion G protein-coupled receptor E5-like Neighboring gene long-chain fatty acid transport protein 1-like Neighboring gene zinc-binding protein A33

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_068452.1 Chromosome 32 Reference Oket_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables prostaglandin E receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thromboxane receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
prostaglandin E2 receptor EP1 subtype-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_023373465.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oket_V2 Primary Assembly

Genomic

  1. NC_068452.1 Reference Oket_V2 Primary Assembly

    Range
    36045373..36056458
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035746478.2 → XP_035602371.2  prostaglandin E2 receptor EP1 subtype-like

    Related
    ENSOKEP00005015312.1, ENSOKET00005017852.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases