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LOC118042066 F-box/kelch-repeat protein At5g42360-like [ Populus alba (white poplar) ]

Gene ID: 118042066, updated on 22-Oct-2023

Summary

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Gene symbol
LOC118042066
Gene description
F-box/kelch-repeat protein At5g42360-like
Locus tag
D5086_0000285790
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus alba
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM523922v1 (GCF_005239225.1) Unplaced Scaffold NW_023271199.1 (433540..436444)

NW_023271199.1Genomic Context describing neighboring genes Neighboring gene probable protein phosphatase 2C 27 Neighboring gene protein seele-like Neighboring gene U-box domain-containing protein 44-like Neighboring gene probable leucine-rich repeat receptor-like protein kinase At1g35710 Neighboring gene MDIS1-interacting receptor like kinase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023271199 Unplaced Scaffold Reference ASM523922v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/kelch-repeat protein At5g42360-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus alba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM523922v1 Primary Assembly

Genomic

  1. NW_023271199.1 Reference ASM523922v1 Primary Assembly

    Range
    433540..436444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035049618.1 → XP_034905509.1  F-box/kelch-repeat protein At5g42360-like

    UniProtKB/TrEMBL
    A0A4U5MZM5
    Conserved Domains (5) summary
    smart00612
    Location:378 → 414
    Kelch; Kelch domain
    smart00256
    Location:141 → 171
    FBOX; A Receptor for Ubiquitination Targets
    PHA03098
    Location:166 → 408
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:227 → 282
    Kelch; KELCH repeat [structural motif]
    pfam01344
    Location:227 → 282
    Kelch_1; Kelch motif
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases