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LOC117938775 dynamin-1-like protein [ Etheostoma cragini (Arkansas darter) ]

Gene ID: 117938775, updated on 22-Oct-2023

Summary

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Gene symbol
LOC117938775
Gene description
dynamin-1-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma cragini
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
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Genomic context

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Location:
chromosome: 23
Exon count:
20
Annotation release Status Assembly Chr Location
100 current CSU_Ecrag_1.0 (GCF_013103735.1) 23 NC_048429.1 (11671614..11683698, complement)

Chromosome 23 - NC_048429.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117939002 Neighboring gene caldesmon 1a Neighboring gene troponin T2e, cardiac Neighboring gene small lysine-rich protein 1 Neighboring gene short transmembrane mitochondrial protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048429.1 Chromosome 23 Reference CSU_Ecrag_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial fission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial fragmentation involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynamin-1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma cragini Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CSU_Ecrag_1.0

Genomic

  1. NC_048429.1 Reference CSU_Ecrag_1.0

    Range
    11671614..11683698 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034863636.1 → XP_034719527.1  dynamin-1-like protein isoform X2

    Conserved Domains (3) summary
    cd08771
    Location:23 → 300
    DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
    pfam01031
    Location:224 → 508
    Dynamin_M; Dynamin central region
    pfam02212
    Location:587 → 675
    GED; Dynamin GTPase effector domain

  2. XM_034863634.1 → XP_034719525.1  dynamin-1-like protein isoform X1

    Conserved Domains (3) summary
    cd08771
    Location:23 → 300
    DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
    pfam01031
    Location:224 → 508
    Dynamin_M; Dynamin central region
    pfam02212
    Location:614 → 702
    GED; Dynamin GTPase effector domain

  3. XM_034863637.1 → XP_034719528.1  dynamin-1-like protein isoform X3

    Conserved Domains (3) summary
    cd08771
    Location:20 → 239
    DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
    pfam01031
    Location:163 → 447
    Dynamin_M; Dynamin central region
    pfam02212
    Location:553 → 641
    GED; Dynamin GTPase effector domain
Nucleotide Protein
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