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LOC117767713 L-serine dehydratase/L-threonine deaminase-like [ Hippoglossus hippoglossus (Atlantic halibut) ]

Gene ID: 117767713, updated on 25-Jan-2024

Summary

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Gene symbol
LOC117767713
Gene description
L-serine dehydratase/L-threonine deaminase-like
See related
EnsemblRapid:ENSHHIG00000008967
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippoglossus hippoglossus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Hippoglossus
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Genomic context

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See LOC117767713 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fHipHip1.pri (GCF_009819705.1) 9 NC_047159.1 (13360296..13362782, complement)

Chromosome 9 - NC_047159.1Genomic Context describing neighboring genes Neighboring gene group 3 secretory phospholipase A2-like Neighboring gene probable E3 ubiquitin-protein ligase HECTD4 Neighboring gene tetratricopeptide repeat protein 28-like Neighboring gene phosphatidylinositol transfer protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047159.1 Chromosome 9 Reference fHipHip1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-serine ammonia-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-serine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in threonine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-serine dehydratase/L-threonine deaminase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippoglossus hippoglossus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHipHip1.pri Primary Assembly

Genomic

  1. NC_047159.1 Reference fHipHip1.pri Primary Assembly

    Range
    13360296..13362782 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034595538.1 → XP_034451429.1  L-serine dehydratase/L-threonine deaminase-like

    Related
    ENSHHIP00000024156.1, ENSHHIT00000024568.1
    Conserved Domains (1) summary
    cd06448
    Location:11 → 320
    L-Ser-dehyd; Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases