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LOC117618832 50S ribosomal protein L9 [ Prunus dulcis (almond) ]

Gene ID: 117618832, updated on 9-Nov-2023

Summary

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Gene symbol
LOC117618832
Gene description
50S ribosomal protein L9
Locus tag
ALMOND_2B006896
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus dulcis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ALMONDv2 (GCF_902201215.1) 2 NC_047651.1 (25341320..25343267, complement)

Chromosome 2 - NC_047651.1Genomic Context describing neighboring genes Neighboring gene nephrocystin-3 Neighboring gene uncharacterized LOC117619011 Neighboring gene RNA-binding KH domain-containing protein RCF3 Neighboring gene protein PLASTID TRANSCRIPTIONALLY ACTIVE 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047651.1 Chromosome 2 Reference ALMONDv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
50S ribosomal protein L9
Names
PREDICTED: 50S ribosomal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ALMONDv2 Primary Assembly

Genomic

  1. NC_047651.1 Reference ALMONDv2 Primary Assembly

    Range
    25341320..25343267 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034348570.1 → XP_034204461.1  50S ribosomal protein L9 isoform X2

    UniProtKB/TrEMBL
    A0A5E4E7D8
    Conserved Domains (1) summary
    PRK00137
    Location:45 → 203
    rplI; 50S ribosomal protein L9; Reviewed

  2. XM_034348569.1 → XP_034204460.1  50S ribosomal protein L9 isoform X2

    UniProtKB/TrEMBL
    A0A5E4E7D8
    Conserved Domains (1) summary
    PRK00137
    Location:45 → 203
    rplI; 50S ribosomal protein L9; Reviewed

  3. XM_034348568.1 → XP_034204459.1  50S ribosomal protein L9 isoform X1

    UniProtKB/TrEMBL
    A0A5E4E9B7
    Conserved Domains (1) summary
    PRK00137
    Location:56 → 214
    rplI; 50S ribosomal protein L9; Reviewed
Nucleotide Protein
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