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LOC116752855 putative protein FAM172B [ Phocoena sinus (vaquita) ]

Gene ID: 116752855, updated on 9-Nov-2023

Summary

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Gene symbol
LOC116752855
Gene description
putative protein FAM172B
See related
Ensembl:ENSPSNG00000002327
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
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Genomic context

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See LOC116752855 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 4 NC_045766.1 (95938300..95950769, complement)

Chromosome 4 - NC_045766.1Genomic Context describing neighboring genes Neighboring gene PEST proteolytic signal containing nuclear protein Neighboring gene tRNA methyltransferase 10C, mitochondrial RNase P subunit Neighboring gene SUMO specific peptidase 7 Neighboring gene U4 spliceosomal RNA Neighboring gene interphotoreceptor matrix proteoglycan 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045766.1 Chromosome 4 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables siRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulatory ncRNA-mediated heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative protein FAM172B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045766.1 Reference mPhoSin1.pri

    Range
    95938300..95950769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032629923.1 → XP_032485814.1  putative protein FAM172B

    UniProtKB/TrEMBL
    A0A8C9B486
    Related
    ENSPSNP00000003052.1, ENSPSNT00000003498.1
Nucleotide Protein
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