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acsf3 acyl-CoA synthetase family member 3 [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116690330, updated on 18-Mar-2024

Summary

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Gene symbol
acsf3
Gene description
acyl-CoA synthetase family member 3
Locus tag
FQN60_011080
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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See acsf3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 1 NC_045733.1 (12223409..12265479, complement)

Chromosome 1 - NC_045733.1Genomic Context describing neighboring genes Neighboring gene SPG7 matrix AAA peptidase subunit, paraplegin Neighboring gene cadherin 15, type 1, M-cadherin (myotubule) Neighboring gene uncharacterized LOC116690368 Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045733.1 Chromosome 1 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables medium-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malonate--CoA ligase ACSF3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045733.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    12223409..12265479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032517217.1 → XP_032373108.1  malonate--CoA ligase ACSF3, mitochondrial

    Conserved Domains (1) summary
    cd05941
    Location:69 → 582
    MCS; Malonyl-CoA synthetase (MCS)
Nucleotide Protein
Heading Accession and Version

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